| Summary of Software Using HDF5 by Type |
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| Name
(with Product URL) |
Application Type |
Free /
Commercial |
Platforms |
Languages |
Short
Description |
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| HDF5 Indexing Prototype |
API for Bitmap and Projection Indices in HDF5 |
Free |
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Prototype for storing bitmap and projection indices in HDF5 |
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| h5py |
API for HDF5 |
Free |
Linux, Mac, Windows |
Python |
Python interface to HDF5 |
more info |
| HDF Java Products |
API for HDF5 |
Free |
Many |
Java |
Java API for HDF and HDF5 and HDFView tool |
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| HDF5 .NET
APIs |
API for HDF5 |
Free |
|
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Prototype wrappers for the HDF5 C library in the .NET
environment |
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| HDF5 High Level APIs |
API for HDF5 |
Free |
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C, Fortran |
High Level APIs that come with HDF5 to simplify code and provide
standards |
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| JHDF5 |
API for HDF5 |
Free |
|
Java |
High Level Java API for HDF5 |
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| NetCDF-4 |
API for HDF5 |
Free |
Many |
Fortran, C++, Java |
Set of interfaces for array-oriented data access |
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| HDF Explorer |
Browser/Editor |
Free |
Windows |
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Data Visualization program for HDF and HDF5 |
more info |
| HDFView |
Browser/Editor |
Free |
Many |
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Java-based tool for viewing and editing HDF and HDF5 files |
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| ViTables |
Browser/Editor |
Free |
Many |
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PyTables and HDF5 file viewer and editor |
more info |
| PyTables |
Database |
Free |
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Python |
Python API to organize and manipulate scientific data tables and
other numeric objects |
more info |
| dxhdf5 |
Format
Conversion |
Free |
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Import HDF5 data into Open DX |
more info |
| H5utils |
Format
Conversion |
Free |
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Conversion and Visualization tools for HDF5 |
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| HDF4 to HDF5
Conversion Library |
Format Conversion |
Free |
Linux, Solaris |
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Library and tools to convert HDF4 files to HDF5 files |
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| HDF5 XML |
Format
Conversion |
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An HDF5 DTD and tool |
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| Cactus |
General Problem Solving |
Free |
|
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Problem solving environment |
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| GriKSL |
General Problem Solving |
Free |
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Develop grid-based simulation and viz techniques for CACTUS |
more info |
| h5check |
HDF Tools |
Free |
Linux, Solaris |
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A tool to check the validity of an HDF5 file |
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| HDF5 Utilities |
HDF Tools |
Free |
All |
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Utilities that come with HDF5 for analyzing and converting HDF5
files and compiling HDF5 applications |
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| LVHDF5 |
Instrumentation |
Free |
|
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Interface between NI LabVIEW and HDF5 |
more info |
| MAQbox |
Instrumentation |
Commercial |
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Portable data acquisition system |
more info |
| NI-HWS |
Instrumentation |
Commercial |
|
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Uses limited subset of HDF5 for storage and retrieval of
waveforms and attributes |
more info |
| H5WS API |
Remote Access |
Free |
Linux |
C |
API that allows remote HDF5 data access using Web Services. |
more info |
| HDF5 Mesh API |
Sci Data Mgmt |
Free |
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C |
Prototype for storing structured and unstructured grids in HDF5 |
see Ensight |
| HL-HDF |
Sci Data Mgmt |
Free |
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C, Python |
C & Python high level library for scientific data in HDF5 |
more info |
| ADIOS |
Special Purpose |
Free |
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IO componentization of different IO transport methods |
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| Bathymetric Attributed
Grid Data Format |
Special Purpose |
Free |
Linux, Win32 |
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File format for storing bathymetric data |
more info |
| Bear |
Special Purpose |
Free |
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Bers slices and holomy representations |
more info |
| CGNS |
Special Purpose |
Free |
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Software for working with CFD Analysis data |
more info |
| Chombo |
Special Purpose |
Free |
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Tools for working with partial differential equations |
more info |
| FLASH |
Special Purpose |
Free |
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Code for simulation of thermonuclear flashes |
more info |
| H5Part, H5Block,
H5PartROOT |
Special Purpose |
Free |
Many |
C, C++, Fortran |
A data storage schema and API for working with particle based
simulations. |
more info |
| HDF-EOS |
Special Purpose |
Free |
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Software for working with remote-sensed data from Earth
Observing System |
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| IGV |
Special Purpose |
Free |
Windows, Mac |
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Viewer for
genomic data |
more info |
| LIBGPIV |
Special Purpose |
Free |
|
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Library for (Digital) Particle Image Velocimetry Technique |
more info |
| MED |
Special Purpose |
Free |
|
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Standard for storing and recovering data associated with
numerical meshes and fields. |
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| OOPIC Pro |
Special Purpose |
Commercial |
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C++, GUI |
2-D PIC (particle-in-cell) code with support for slab and
cylindrical geometries |
more info |
| PAM-CRASH |
Special Purpose |
Commercial |
Unix, Linux, Windows |
C, Fortran |
ESI's open HDF5 database format to store results of FEM-based
simulations |
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| Paramesh |
Special Purpose |
Free |
|
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Fortran subroutines to extend serial AMR code to parallel |
more info |
| Q5Cost |
Special Purpose |
Free |
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Fortran |
Library and interface used in Quantum Chemistry |
more info |
| RAMS |
Special Purpose |
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Atmospheric Modeling System |
more info |
| Scilab |
Special Purpose |
Free |
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Scientific software package for numerical computations |
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| Swarm |
Special Purpose |
Free |
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Simulator for fine-grained, composable scheduling |
more info |
| SWX |
Special Purpose |
Free |
|
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Space Weather Explorer to visualize space weather model output
in 3D |
more info |
| THESEUS-FE |
Special Purpose |
Commercial |
Linux, Windows |
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Simulation software based on Finite-Element solver methodology
for handling thermal radiation |
more info |
| Zori |
Special Purpose |
Free |
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Calculate properties of atoms/molecules using quantum Monte
Carlo methods |
more info |
| R |
Statistics,
Graphics |
Free |
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R |
System for statistical computation and graphics, has HDF5
interface |
more info |
| Field3D |
Visualization |
Free |
Linux, Mac |
C++ |
Library/format for storing voxel data |
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| OSSIM |
Visualization |
Free |
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Open Source Software Image Map library for geospatial image
processing |
more info |
| ParaView |
Visualization |
Free |
|
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Visualize large data sets in serial or parallel environments,
using VTK |
more info |
| Tecplot |
Visualization |
Commercial |
Many |
|
Interactive visualization program |
more info |
| BEAT |
Visualization/Analysis |
Free |
Unix, Windows,Mac |
|
Toolkit for working w/atmospheric data |
more info |
| Data Visualizer
for O-Matrix |
Visualization/Analysis |
Commercial |
Windows |
|
O-Matrix command-line interface that works with Intel Array
Visualizer |
more info |
| EnSight |
Visualization/Analysis |
Commercial |
Many |
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Tools for engineering and scientific simulation |
more info |
| Geomatica |
Visualization/Analysis |
Commercial |
|
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Integrated software system for remote sensing and image
processing |
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| GNU Octave |
Visualization/Analysis |
Free |
|
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MATLAB-like tool |
more info |
| IDL |
Visualization/Analysis |
Commercial |
Many |
IDL |
Visualize and analyze HDF data with IDL. Query, read HDF files. |
more info |
| Igor Pro |
Visualization/Analysis |
Commercial |
Windows, Mac |
C, Igor |
Visualize/analyze 1D, 2D, 3D data |
more info |
| Intel
Array Visualizer |
Visualization/Analysis |
Free |
Windows |
|
Windows app to read, write, display array data from HDF4, HDF5,
others |
more info |
| Mathematica |
Visualization/Analysis |
Commercial |
|
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Environment for technical tasks ranging from computations to
visualizing or modeling data |
more info |
| MATLAB |
Visualization/Analysis |
Commercial |
Many |
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Numeric computation, advanced graphics and visualization. Query,
read HDF files |
more info |
| O-Matrix |
Visualization/Analysis |
Commercial |
|
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Interpreted matrix language for data analysis and visualization |
more info |
| Opticks |
Visualization/Analysis |
Free |
|
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Expandable remote sensing and imagery analysis platform |
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| PV-WAVE |
Visualization/Analysis |
Commercial |
Many |
PV-WAVE |
Visualization and Analysis language and environment |
more info |
| SLh5 |
Visualization/Analysis |
Free |
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S-Lang |
Open source HDF5 module for S-Lang |
more info |
| SYSTEMA / THERMICA |
Visualization/Analysis |
Commercial |
Linux, Solaris, Windows |
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Spacecraft modeler and thermal analyser |
more info |
| VisAD |
Visualization/Analysis |
Free |
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Java |
Java toolkit for interactive and collaborative viz and analysis |
more info |
| VisIt |
Visualization/Analysis |
Free |
|
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Tool for visualizing fields in 2D and 3D meshes |
more info |
| Yorick |
Visualization/Analysis |
Free |
Many |
Yorick |
Interpreted programming language |
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| Pomegranate |
Web service software, web API, library and command line tool |
Free and open source |
Independent |
Python |
Webification of science data files |
more info |
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